dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01846
Location and strand information: 1772261 - 1772926 (+)
Family: 3.A.1.3.6
Protein type: TC
Protein description: putative glutamine ABC transporter permease protein GlnM

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01847
Location and strand information: 1772905 - 1773582 (+)
Family: 3.A.1.3.10
Protein type: TC
Protein description: L-cystine transport system permease protein YecS

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01848
Location and strand information: 1773563 - 1774300 (+)
Family: 3.A.1.3.21
Protein type: TC
Protein description: Glutamine transport ATP-binding protein GlnQ

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01849
Location and strand information: 1774314 - 1775555 (+)
Family: null
Protein type: null
Protein description: (S)-ureidoglycine--glyoxylate transaminase

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01850
Location and strand information: 1775552 - 1776790 (+)
Family: null
Protein type: null
Protein description: N-carbamoyl-L-amino acid hydrolase

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01851
Location and strand information: 1776787 - 1777902 (-)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Maltose/maltodextrin import ATP-binding protein MalK

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01852
Location and strand information: 1778224 - 1779438 (+)
Family: 3.A.1.1.2
Protein type: TC
Protein description: Cyclodextrin-binding protein

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01853
Location and strand information: 1779496 - 1780800 (+)
Family: 3.A.1.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01854
Location and strand information: 1780812 - 1781663 (+)
Family: 3.A.1.1.2
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01855
Location and strand information: 1781666 - 1782868 (+)
Family: GH53|CBM61
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 6.8368
Protein molecular weight: 44523.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01856
Location and strand information: 1782898 - 1784955 (+)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BglY
Protein isoelectric point: 6.5326
Protein molecular weight: 77629.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01857
Location and strand information: 1785086 - 1785328 (+)
Family: 4.A.1.1.1
Protein type: TC
Protein description: PTS system glucose-specific EIICB component

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01858
Location and strand information: 1785431 - 1786696 (-)
Family: 1.B.3.1.1
Protein type: TC
Protein description: Maltoporin

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01859
Location and strand information: 1786966 - 1788042 (+)
Family: LacI
Protein type: TF
Protein description: Lactose operon repressor

Gene clsuter ID: MGYG000002500_2|CGC29
Gene ID: MGYG000002500_01860
Location and strand information: 1788085 - 1789086 (-)
Family: 1.A.26.1.4
Protein type: TC
Protein description: Magnesium transporter MgtE

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002500_01855	GH53_e1\|CBM61_e2\|3.2.1.89	arabinogalactan
MGYG000002500_01856	GH42_e16\|3.2.1.23	arabinogalactan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinogalactan

Substrate predicted by dbCAN-PUL is beta-galactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002500_01846	putative glutamine ABC transporter permease protein GlnM	TC	1772261	1772926	+	3.A.1.3.6
MGYG000002500_01847	L-cystine transport system permease protein YecS	TC	1772905	1773582	+	3.A.1.3.10
MGYG000002500_01848	Glutamine transport ATP-binding protein GlnQ	TC	1773563	1774300	+	3.A.1.3.21
MGYG000002500_01849	(S)-ureidoglycine--glyoxylate transaminase	null	1774314	1775555	+	Aminotran_5
MGYG000002500_01850	N-carbamoyl-L-amino acid hydrolase	null	1775552	1776790	+	Peptidase_M20
MGYG000002500_01851	Maltose/maltodextrin import ATP-binding protein MalK	TC	1776787	1777902	-	3.A.1.1.4
MGYG000002500_01852	Cyclodextrin-binding protein	TC	1778224	1779438	+	3.A.1.1.2
MGYG000002500_01853	hypothetical protein	TC	1779496	1780800	+	3.A.1.1.2
MGYG000002500_01854	L-arabinose transport system permease protein AraQ	TC	1780812	1781663	+	3.A.1.1.2
MGYG000002500_01855	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	1781666	1782868	+	GH53\| CBM61
MGYG000002500_01856	Beta-galactosidase BglY	CAZyme	1782898	1784955	+	GH42
MGYG000002500_01857	PTS system glucose-specific EIICB component	TC	1785086	1785328	+	4.A.1.1.1
MGYG000002500_01858	Maltoporin	TC	1785431	1786696	-	1.B.3.1.1
MGYG000002500_01859	Lactose operon repressor	TF	1786966	1788042	+	LacI
MGYG000002500_01860	Magnesium transporter MgtE	TC	1788085	1789086	-	1.A.26.1.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature